Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0235Penicillin binding protein 1C, peptidoglycan biosynthesis. (776 aa)    
Predicted Functional Partners:
Lery_0236
Hypothetical protein; Alpha-2-macroglobulin family N-terminal region.
   
 0.981
mrdA
Penicillin binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
  
  
 0.908
ponA
Penicillin binding protein 1A.
  
  
0.883
ftsI
Peptidoglycan synthetase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
     
 0.876
dacB
D-alanyl-D-alanine carboxypeptidase.
   
 
 0.866
dacA
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.850
Lery_0646
AMPC cephalosporinase.
     
  0.596
Lery_1629
D-alanyl-D-alanine carboxypeptidase.
     
  0.596
Lery_0234
Hypothetical protein.
       0.580
Lery_0675
Beta-lactamase.
     
  0.462
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.