STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0405Rrf2 family transporter protein. (153 aa)    
Predicted Functional Partners:
nifU_1
NifU-like protein.
 
 
 0.995
iscS
Cysteine desulfurase NifS.
  
 
 0.986
sufD
Component of SufBCD complex.
 
   
 0.858
Lery_0404
Cysteine desulfurase.
 
   
 0.851
sufS
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
  0.835
Lery_0403
ATP transporter ATP- binding protein.
     
 0.829
nifU_2
NifU-like protein.
  
 
 0.826
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
  
  
 0.806
poxA
lysyl-tRNA synthetase.
       0.800
Lery_0399
Metal-sulfur cluster biosynthetic enzyme.
       0.800
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.