Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
enhCEnhanced entry protein EnhC. (1204 aa)    
Predicted Functional Partners:
enhA_2
Enhanced entry protein EnhA.
 
     0.846
enhB_1
Enhanced entry protein EnhB.
     
 0.814
Lery_0719
Sel-1 protein.
  
     0.629
Lery_0432
GGDEF domain-containing sensory box protein.
       0.618
sdhA_2
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 
 0.613
mip
Macrophage infectivity potentiator.
   
 
 0.610
Lery_0428
Hypothetical protein.
       0.594
Lery_0474
Protein IcmE (DotG).
  
     0.590
Lery_0186
Protein-tyrosine phosphatase.
  
     0.588
lvrA_1
Legionella vir region protein.
  
     0.588
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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