STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0435Phenylalanine-4-hydroxylase. (272 aa)    
Predicted Functional Partners:
Lery_0291
Pterin-4-alpha-carbinolamine dehydratase.
 
 0.972
lly
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.924
hmgA
Homogentisate 1,2-dioxygenase.
 
  
 0.906
Lery_2026
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.713
Lery_1668
Polyketide synthase module.
     
 0.692
Lery_0436
Sterol desaturase-related protein.
 
     0.658
Lery_2025
Fumarylacetoacetate hydrolase.
 
  
 0.640
Lery_2022
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
  0.581
Lery_1176
Histidine ammonia lyase.
   
 
 0.571
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.566
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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