STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0468GNAT family acetyltransferase. (180 aa)    
Predicted Functional Partners:
Lery_2432
Oxidoreductase, FAD-binding protein.
  
  
  0.774
Lery_1099
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.771
Lery_2187
Putative conjugative transfer protein TraI.
  
    0.694
rfbA
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.664
Lery_2175
DEAD/DEAH box helicase.
  
     0.656
Lery_2190
Putative sex pilus assembly and mating pair protein TraG.
  
     0.651
Lery_2192
Putative conjugative transfer protein TrbB.
  
     0.638
Lery_2433
Hypothetical protein.
  
     0.633
cecC_2
Chemiosmotic efflux system C protein C.
  
     0.625
Lery_0469
Protein IcmB (DotO).
       0.623
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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