STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0475IcmK protein. (360 aa)    
Predicted Functional Partners:
Lery_0474
Protein IcmE (DotG).
 
 
 
 0.993
Lery_0476
Protein IcmL (DotI).
 
   
 0.975
Lery_0473
Protein IcmG (DotF).
   
 
 0.972
dotC
Defect in organelle trafficking lipoprotein DotC.
 
 
 
 0.961
lphA
LphA (DotK).
   
   0.934
Lery_0616
DotA.
 
 
   0.932
Lery_0480
Protein IcmO (DotL).
 
   
 0.928
icmP
IcmP protein.
 
   
 0.923
Lery_0469
Protein IcmB (DotO).
 
   
 0.921
Lery_0478
Protein IcmL (DotI).
 
   
 0.899
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.