Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_0552Putative lambdoid prophage Rac integrase; Belongs to the 'phage' integrase family. (358 aa)    
Predicted Functional Partners:
Lery_0553
Phage excisionase.
       0.788
Lery_0554
Hypothetical protein.
       0.778
fabA
(3R)-hydroxymyristoyl-ACP dehydratase.
  
     0.643
Lery_0855
Hypothetical protein.
  
     0.608
Lery_1272
Hypothetical protein.
  
     0.579
ybiA_1
Swarming motility protein YbiA.
  
     0.545
Lery_1699
Coiled-coil protein.
  
     0.543
ybiA_2
Swarming motility protein YbiA.
  
     0.540
Lery_0284
P-hydroxybenzoic acid efflux subunit AaeB.
  
     0.534
Lery_2171
Putative addiction module antidote protein, family (containing the CopG/Arc/MetJ DNA-binding domain).
  
     0.528
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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