ykoV protein (Legionella erythra) - STRING interaction network

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ykoV

Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (283 aa)

Predicted Functional Partners:

ykoU

0.993

Lery_1213

0.748

Lery_1900

0.614

Lery_0564

0.538

Lery_0561

0.494

Lery_0120

0.468

Lery_0087

0.462

Lery_0567

0.423

Your Current Organism:

Legionella erythra

NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lery_0087	ykoU	Lery_0087	Lery_0562	Hypothetical protein.	Putative ATP-dependent DNA ligase YkoU.	0.404
Lery_0087	ykoV	Lery_0087	Lery_0563	Hypothetical protein.	Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.462
Lery_0120	ykoV	Lery_0120	Lery_0563	Hypothetical protein.	Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.468
Lery_0561	ykoU	Lery_0561	Lery_0562	Transmembrane protein.	Putative ATP-dependent DNA ligase YkoU.	0.701
Lery_0561	ykoV	Lery_0561	Lery_0563	Transmembrane protein.	Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.494
Lery_0564	ykoV	Lery_0564	Lery_0563	Hypothetical protein.	Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.538
Lery_0567	ykoU	Lery_0567	Lery_0562	Low affinity iron permease.	Putative ATP-dependent DNA ligase YkoU.	0.631
Lery_0567	ykoV	Lery_0567	Lery_0563	Low affinity iron permease.	Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.423
Lery_1213	Lery_1900	Lery_1213	Lery_1900	Eukaryotic DNA topoisomerase I, catalytic core.	ATP dependent DNA ligase.	0.613
Lery_1213	ykoU	Lery_1213	Lery_0562	Eukaryotic DNA topoisomerase I, catalytic core.	Putative ATP-dependent DNA ligase YkoU.	0.859
Lery_1213	ykoV	Lery_1213	Lery_0563	Eukaryotic DNA topoisomerase I, catalytic core.	Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.748
Lery_1900	Lery_1213	Lery_1900	Lery_1213	ATP dependent DNA ligase.	Eukaryotic DNA topoisomerase I, catalytic core.	0.613
Lery_1900	ykoU	Lery_1900	Lery_0562	ATP dependent DNA ligase.	Putative ATP-dependent DNA ligase YkoU.	0.563
Lery_1900	ykoV	Lery_1900	Lery_0563	ATP dependent DNA ligase.	Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.614
ykoU	Lery_0087	Lery_0562	Lery_0087	Putative ATP-dependent DNA ligase YkoU.	Hypothetical protein.	0.404
ykoU	Lery_0561	Lery_0562	Lery_0561	Putative ATP-dependent DNA ligase YkoU.	Transmembrane protein.	0.701
ykoU	Lery_0567	Lery_0562	Lery_0567	Putative ATP-dependent DNA ligase YkoU.	Low affinity iron permease.	0.631
ykoU	Lery_1213	Lery_0562	Lery_1213	Putative ATP-dependent DNA ligase YkoU.	Eukaryotic DNA topoisomerase I, catalytic core.	0.859
ykoU	Lery_1900	Lery_0562	Lery_1900	Putative ATP-dependent DNA ligase YkoU.	ATP dependent DNA ligase.	0.563
ykoU	ykoV	Lery_0562	Lery_0563	Putative ATP-dependent DNA ligase YkoU.	Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.993

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