STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0648Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein. (369 aa)    
Predicted Functional Partners:
Lery_1544
Amino acid (glutamine) ABC transporter permease.
    
 0.676
Lery_1543
Amino acid (glutamine) ABC transporter ATP binding protein.
   
 
 0.634
Lery_2215
Hypothetical protein.
  
  
  0.629
potD
Spermidine/putrescine-binding periplasmic protein precursor potD (SPBP); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
     
 0.622
Lery_0654
Hypothetical protein.
    
  0.528
Lery_0647
Hypothetical protein.
       0.522
Lery_0655
Two-component sensor histidine kinase.
    
 0.520
brnQ
Branched-chain amino acid transport system 2 carrier protein; Component of the transport system for branched-chain amino acids.
     
 0.499
Lery_0649
High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.487
Lery_0650
Hypothetical protein.
       0.475
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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