STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0670Tyrosine phosphatase II superfamily protein. (320 aa)    
Predicted Functional Partners:
yjeA
Endo-1,4-beta-xylanase.
  
 0.939
lepA-2
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.836
Lery_2193
Putative conjugative transfer protein TraF.
  
  
  0.758
plaB
Phospholipase.
  
  
 0.754
bcp
Acetylpolyamine aminohydrolase.
  
   0.751
Lery_2191
Putative conjugative transfer protein TraH.
  
     0.743
Lery_0035
Major facilitator family transporter.
  
     0.740
rssA
Esterase of the alpha-beta hydrolase superfamily protein.
  
  
  0.740
Lery_2215
Hypothetical protein.
  
     0.734
Lery_2194
Conjugal transfer mating pair stabilization protein TraN.
  
     0.732
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.