Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lery_0089 | Lery_1051 | Lery_0089 | Lery_1051 | Aminotransferase class-III. | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.818 |
| Lery_0089 | Lery_1668 | Lery_0089 | Lery_1668 | Aminotransferase class-III. | Polyketide synthase module. | 0.872 |
| Lery_0089 | Lery_1681 | Lery_0089 | Lery_1681 | Aminotransferase class-III. | 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.673 |
| Lery_0089 | argD | Lery_0089 | Lery_2726 | Aminotransferase class-III. | Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.741 |
| Lery_0089 | proC | Lery_0089 | Lery_0703 | Aminotransferase class-III. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.543 |
| Lery_0163 | proC | Lery_0163 | Lery_0703 | 2OG-Fe(II) oxygenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.576 |
| Lery_0704 | pilT | Lery_0704 | Lery_0705 | Pyridoxal-5'-phosphate dependent enzyme family transporter protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Twitching motility protein PilT. | 0.590 |
| Lery_0704 | proC | Lery_0704 | Lery_0703 | Pyridoxal-5'-phosphate dependent enzyme family transporter protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.889 |
| Lery_0704 | yggT | Lery_0704 | Lery_0702 | Pyridoxal-5'-phosphate dependent enzyme family transporter protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | YggT family protein. | 0.888 |
| Lery_1051 | Lery_0089 | Lery_1051 | Lery_0089 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Aminotransferase class-III. | 0.818 |
| Lery_1051 | Lery_1668 | Lery_1051 | Lery_1668 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Polyketide synthase module. | 0.810 |
| Lery_1051 | argD | Lery_1051 | Lery_2726 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.848 |
| Lery_1051 | proC | Lery_1051 | Lery_0703 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.827 |
| Lery_1668 | Lery_0089 | Lery_1668 | Lery_0089 | Polyketide synthase module. | Aminotransferase class-III. | 0.872 |
| Lery_1668 | Lery_1051 | Lery_1668 | Lery_1051 | Polyketide synthase module. | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.810 |
| Lery_1668 | Lery_1681 | Lery_1668 | Lery_1681 | Polyketide synthase module. | 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.717 |
| Lery_1668 | argD | Lery_1668 | Lery_2726 | Polyketide synthase module. | Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.563 |
| Lery_1668 | dapF | Lery_1668 | Lery_1423 | Polyketide synthase module. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.692 |
| Lery_1668 | proC | Lery_1668 | Lery_0703 | Polyketide synthase module. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.625 |
| Lery_1681 | Lery_0089 | Lery_1681 | Lery_0089 | 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Aminotransferase class-III. | 0.673 |
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