Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0719Sel-1 protein. (120 aa)    
Predicted Functional Partners:
Lery_0720
General secretion pathway protein C.
       0.866
Lery_0721
O-methyltransferase.
       0.741
Lery_2531
Putative membrane protein YdgA-like protein.
  
     0.654
Lery_0474
Protein IcmE (DotG).
  
     0.653
enhC
Enhanced entry protein EnhC.
  
     0.629
Lery_1280
Hypothetical protein.
  
     0.626
Lery_2054
Ankyrin repeat domain-containing protein.
  
 
   0.617
lvrA_1
Legionella vir region protein.
  
     0.614
Lery_0186
Protein-tyrosine phosphatase.
  
     0.567
Lery_0198
Hypothetical protein.
  
     0.567
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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