STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0736FtsX-like permease family protein. (825 aa)    
Predicted Functional Partners:
Lery_0737
ABC transporter ATP binding protein.
 
  
  0.953
tesA
Esterase TesA precursor.
 
     0.905
ispB_2
Octaprenyl-diphosphate synthase.
  
    0.744
lolD
ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
 
 0.585
Lery_1654
ABC transporter ATP binding protein.
  
 
 0.544
Lery_2249
ABC transporter ATP-binding protein.
  
 
 0.544
Lery_1653
ABC transporter permease.
    
  0.453
lolC
Lipoprotein-releasing system transmembrane protein lolC.
    
  0.453
Lery_0575
L-sorbosone dehydrogenase.
  
     0.417
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.