STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parB_1Chromosome partitioning protein ParB; Belongs to the ParB family. (298 aa)    
Predicted Functional Partners:
parA_1
Sporulation initiation inhibitor protein Soj.
 
 
 0.902
parA_2
Chromosome partitioning protein ParA.
 
 
 0.879
soj
Sporulation initiation inhibitor protein Soj.
 
 
 0.870
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.774
parB_4
Chromosome partitioning protein ParB; Belongs to the ParB family.
  
     0.774
ftsK
Cell division protein FtsK.
  
   
 0.641
gidB
Glucose inhibited division protein B GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.635
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
  
 
 
 0.501
cyaA_1
Fused adenylate cyclase/two component hybrid sensor/regulator.
       0.458
Lery_2432
Oxidoreductase, FAD-binding protein.
   
   0.418
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.