Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lery_0747 | tatA | Lery_0747 | Lery_0745 | SCP-2 sterol transfer family protein. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.807 |
| Lery_0747 | tatB | Lery_0747 | Lery_0744 | SCP-2 sterol transfer family protein. | TatB protein (twin arginine translocation). | 0.807 |
| Lery_0747 | ubiB | Lery_0747 | Lery_0746 | SCP-2 sterol transfer family protein. | Ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.830 |
| Lery_0747 | ubiE | Lery_0747 | Lery_0748 | SCP-2 sterol transfer family protein. | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.874 |
| Lery_2272 | tatA | Lery_2272 | Lery_0745 | AraC family transcriptional regulator. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.856 |
| Lery_2272 | tatB | Lery_2272 | Lery_0744 | AraC family transcriptional regulator. | TatB protein (twin arginine translocation). | 0.856 |
| copA_3 | guaA | Lery_2438 | Lery_1031 | Copper efflux ATPase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.755 |
| copA_3 | tatA | Lery_2438 | Lery_0745 | Copper efflux ATPase. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.528 |
| copA_3 | tatB | Lery_2438 | Lery_0744 | Copper efflux ATPase. | TatB protein (twin arginine translocation). | 0.513 |
| copA_3 | tatC | Lery_2438 | Lery_2750 | Copper efflux ATPase. | Sec-independent (periplasmic) protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.731 |
| guaA | copA_3 | Lery_1031 | Lery_2438 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Copper efflux ATPase. | 0.755 |
| guaA | tatA | Lery_1031 | Lery_0745 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.969 |
| guaA | tatB | Lery_1031 | Lery_0744 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | TatB protein (twin arginine translocation). | 0.969 |
| guaA | yajC | Lery_1031 | Lery_0300 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | SecYEG protein translocase auxillary subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. | 0.493 |
| hisI | tatA | Lery_0995 | Lery_0745 | phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.533 |
| hisI | tatB | Lery_0995 | Lery_0744 | phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | TatB protein (twin arginine translocation). | 0.533 |
| tatA | Lery_0747 | Lery_0745 | Lery_0747 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | SCP-2 sterol transfer family protein. | 0.807 |
| tatA | Lery_2272 | Lery_0745 | Lery_2272 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | AraC family transcriptional regulator. | 0.856 |
| tatA | copA_3 | Lery_0745 | Lery_2438 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Copper efflux ATPase. | 0.528 |
| tatA | guaA | Lery_0745 | Lery_1031 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.969 |
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