STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0792Serine transporter. (431 aa)    
Predicted Functional Partners:
Lery_0112
DNA-binding protein; Belongs to the Dps family.
    
   0.832
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
   0.511
Lery_2389
Hypothetical protein.
  
     0.471
Lery_2387
Bile acid beta-glucosidase.
  
     0.463
Lery_2396
Exported membrane protein.
  
     0.460
Lery_2926
L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
  
 0.459
Lery_2398
Type IV secretory protein VirB4 component.
  
     0.454
Lery_2385
Hypothetical protein.
  
     0.451
Lery_2395
Hypothetical protein.
  
     0.450
Lery_2400
Pilus retraction ATPase PilT.
  
     0.449
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.