Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lery_0796Hypothetical protein; N-terminal GNAT family acetyltransferase. (297 aa)    
Predicted Functional Partners:
Lery_2054
Ankyrin repeat domain-containing protein.
  
   
 0.761
fabF_1
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.716
Lery_0198
Hypothetical protein.
  
     0.712
Lery_0474
Protein IcmE (DotG).
  
     0.709
lvrA_1
Legionella vir region protein.
  
     0.689
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.676
Lery_1280
Hypothetical protein.
  
     0.674
Lery_0616
DotA.
  
     0.672
Lery_2748
Putative helicase/relaxase.
  
     0.659
Lery_2746
Cysteine protease.
  
     0.652
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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