STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0802Proline betaine transport protein like protein. (417 aa)    
Predicted Functional Partners:
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
   
    0.742
Lery_1668
Polyketide synthase module.
    
 0.662
ribE
Riboflavin synthase alpha chain.
   
    0.615
Lery_0803
Deoxyribodipyrimidine photolyase phrB; Belongs to the DNA photolyase family.
       0.566
Lery_0285
Hemolysin D.
  
  0.478
Lery_1945
2-acylglycerophosphoethanolamine acyltransferase.
     
 0.464
Lery_0175
Hemolysin D.
   
  0.405
Lery_0529
Hypothetical protein.
   
  0.405
lssD_1
Secretion system protein D.
   
  0.405
lssD_2
Secretion system protein D.
   
  0.405
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.