Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sojSporulation initiation inhibitor protein Soj. (227 aa)    
Predicted Functional Partners:
parB_3
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.951
parB_2
Chromosome partitioning protein parB; Belongs to the ParB family.
 
 
 0.895
parB_4
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.886
parB_1
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.870
parA_2
Chromosome partitioning protein ParA.
  
     0.730
Lery_1256
Glycosyltransferase, family 2.
  
 
 0.712
abcT3
ABC transporter ATP binding protein.
       0.545
Lery_0821
ABC transporter permease.
       0.541
cobN
Aerobic cobaltochelatase subunit CobN.
     
  0.535
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.435
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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