Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Lery_0835ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. (226 aa)    
Predicted Functional Partners:
Lery_0779
Hypothetical protein.
  
     0.740
Lery_0114
Hypothetical protein.
 
     0.733
Lery_2070
DamX-related protein.
  
     0.715
Lery_0834
Hypothetical protein.
       0.699
Lery_2480
Hypothetical protein.
  
     0.676
Lery_1556
Hypothetical protein.
  
     0.668
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.663
iraA
Small-molecule methyltransferase IraA.
  
     0.661
Lery_2303
LphB.
  
     0.657
Lery_2477
Acid sphingomyelinase-like phosphodiesterase.
  
     0.653
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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