Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lery_0837 | Lery_0841 | Lery_0837 | Lery_0841 | O-antigen biosynthesis protein. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.512 |
| Lery_0837 | gap | Lery_0837 | Lery_0840 | O-antigen biosynthesis protein. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.533 |
| Lery_0837 | pgk | Lery_0837 | Lery_0839 | O-antigen biosynthesis protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.544 |
| Lery_0837 | pykA | Lery_0837 | Lery_0838 | O-antigen biosynthesis protein. | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.533 |
| Lery_0837 | wcfH | Lery_0837 | Lery_0836 | O-antigen biosynthesis protein. | Deacetylase. | 0.806 |
| Lery_0841 | Lery_0837 | Lery_0841 | Lery_0837 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | O-antigen biosynthesis protein. | 0.512 |
| Lery_0841 | Lery_1854 | Lery_0841 | Lery_1854 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Pyruvate dehydrogenase E1 component oxidoreductase protein AceE; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.601 |
| Lery_0841 | gap | Lery_0841 | Lery_0840 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.970 |
| Lery_0841 | pgk | Lery_0841 | Lery_0839 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.966 |
| Lery_0841 | pykA | Lery_0841 | Lery_0838 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.955 |
| Lery_0841 | wcfH | Lery_0841 | Lery_0836 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Deacetylase. | 0.728 |
| Lery_1256 | wcfH | Lery_1256 | Lery_0836 | Glycosyltransferase, family 2. | Deacetylase. | 0.796 |
| Lery_1854 | Lery_0841 | Lery_1854 | Lery_0841 | Pyruvate dehydrogenase E1 component oxidoreductase protein AceE; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.601 |
| Lery_1854 | gap | Lery_1854 | Lery_0840 | Pyruvate dehydrogenase E1 component oxidoreductase protein AceE; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.714 |
| Lery_1854 | pykA | Lery_1854 | Lery_0838 | Pyruvate dehydrogenase E1 component oxidoreductase protein AceE; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.731 |
| Lery_1854 | wcfH | Lery_1854 | Lery_0836 | Pyruvate dehydrogenase E1 component oxidoreductase protein AceE; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Deacetylase. | 0.501 |
| Lery_2088 | Lery_2092 | Lery_2088 | Lery_2092 | Dolichol monophosphate mannose synthase. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.440 |
| Lery_2088 | wcfH | Lery_2088 | Lery_0836 | Dolichol monophosphate mannose synthase. | Deacetylase. | 0.515 |
| Lery_2092 | Lery_2088 | Lery_2092 | Lery_2088 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Dolichol monophosphate mannose synthase. | 0.440 |
| Lery_2092 | wcfH | Lery_2092 | Lery_0836 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Deacetylase. | 0.515 |
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