Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_0876Putative lambdoid prophage Rac integrase; Belongs to the 'phage' integrase family. (395 aa)    
Predicted Functional Partners:
Lery_0875
Phage excisionase.
       0.788
Lery_0874
Hypothetical protein.
       0.778
Lery_0873
Peptidase, S24 family.
     
 0.612
fabA
(3R)-hydroxymyristoyl-ACP dehydratase.
  
     0.568
Lery_0871
Hypothetical protein.
       0.503
Lery_0872
Hypothetical protein.
       0.503
Lery_1099
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.500
Lery_1051
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.499
Lery_0869
Putative molybdenum carrier.
 
     0.497
Lery_0855
Hypothetical protein.
  
     0.492
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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