Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Lery_0878Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. (999 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
0.999
Lery_1726
Hypothetical protein.
  
 
 0.991
Lery_2930
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 0.990
trpE
Anthranilate synthase.
  
 
 0.980
Lery_0879
Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.973
bioI
Biotin biosynthesis cytochrome P450.
 
 0.949
pabB
Para-aminobenzoate synthase, component I.
  
 
 0.942
fadD-1
Long chain fatty acid-CoA ligase.
 
 
0.911
acpP_1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.911
acpP_2
Acyl carrier protein.
  
 
 0.905
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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