STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0882Hypothetical protein. (322 aa)    
Predicted Functional Partners:
Lery_0881
Hypothetical protein.
 
   
 0.954
Lery_0237
Protein with a bacterial immunoglobulin-like domain protein.
  
     0.698
Lery_0873
Peptidase, S24 family.
  
     0.696
Lery_0555
Peptidase, S24 family.
  
     0.656
Lery_0173
Hypothetical protein.
  
     0.586
Lery_1673
Phage-related integrase; Belongs to the 'phage' integrase family.
  
     0.495
Lery_0880
Major facilitator superfamily (MFS) transporter.
       0.472
Lery_1674
ATP-dependent DNA helicase.
  
     0.454
Lery_2033
Transposase.
  
     0.427
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.