STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0890Choline monooxygenase. (362 aa)    
Predicted Functional Partners:
Lery_2432
Oxidoreductase, FAD-binding protein.
 
 
 0.966
Lery_1668
Polyketide synthase module.
  
 0.827
fadH
2,4-dienoyl-CoA reductase FadH1.
  
 
 0.803
bioI
Biotin biosynthesis cytochrome P450.
 
  
 0.796
Lery_2754
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 
 0.757
Lery_0891
Amino acid (lysine) permease.
       0.732
sdhA_2
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
 0.709
Lery_1559
Pyoverdine biosynthesis protein PvcB.
  
  
  0.695
Lery_1945
2-acylglycerophosphoethanolamine acyltransferase.
   
 
 0.693
Lery_1284
Abi-like protein.
  
 
 0.680
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.