Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0891Amino acid (lysine) permease. (479 aa)    
Predicted Functional Partners:
Lery_0890
Choline monooxygenase.
       0.732
Lery_0892
Hypothetical protein.
       0.588
Lery_0889
LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.527
Lery_1146
Amino acid transporter PotE.
  
  
  0.497
Lery_1100
Peptide transport protein, POT family.
  
     0.471
yhiP
POT family transporter peptide transport protein.
  
     0.415
Lery_1994
Hypothetical protein.
  
     0.402
Lery_1675
Amino acid transporter.
  
  
  0.401
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.