STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0922HDOD domain protein. (378 aa)    
Predicted Functional Partners:
Lery_2464
Response regulator receiver domain protein.
   
  0.722
Lery_2897
Signal transduction histidine kinase.
 
  
  0.679
Lery_2143
Sensory histidine-kinase / response regulator.
   
 
 0.587
Lery_0921
Hypothetical protein.
       0.515
Lery_1089
Guanylate cyclase.
 
     0.512
gacS/letS
Transmission sensor LetS.
   
 
 0.477
Lery_2898
Guanylate cyclase.
 
     0.473
Lery_0333
Flagellar biosynthesis MinD.
 
     0.453
Lery_0656
GGDEF domain-containing sensory box protein.
 
 
  0.453
Lery_2110
Type IV fimbrial biogenesis PilY1-like protein.
  
    0.439
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.