STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0932Regulatory protein (EAL domain). (519 aa)    
Predicted Functional Partners:
Lery_1701
GGDEF/EAL domain-containing sensory box protein.
   
 0.917
Lery_2155
Putative regulatory protein (GGDEF domain).
 
   
 0.882
Lery_2415
Diguanylate kinase.
 
   
 0.879
Lery_2277
Two component histidine kinase.
  
   
 0.777
Lery_1410
Sensory box protein.
  
   
 0.772
Lery_1998
GGDEF domain-containing protein.
   
 0.762
Lery_2270
Sensor histidine kinase.
  
   
 0.755
Lery_0573
Sensor histidine kinase.
 
   
 0.750
Lery_0749
Regulatory protein (GGDEF, PAS, PAC domains).
  
   
 0.746
cyaA_1
Fused adenylate cyclase/two component hybrid sensor/regulator.
 
   
 0.704
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.