STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcpAcetylpolyamine aminohydrolase. (499 aa)    
Predicted Functional Partners:
yjeA
Endo-1,4-beta-xylanase.
  
 
 0.965
Lery_2007
SNF2/RAD54 family transporter domain-containing protein.
    
 0.957
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
    
 0.911
Lery_1097
Photosystem I assembly protein Ycf3.
  
 
  0.847
Lery_0052
Hypothetical protein.
    
 0.829
udk
Uridine kinase.
    
  0.825
qseC_2
Two component sensor kinase.
  
  
  0.825
Lery_2311
Uridine/cytidine kinase.
    
  0.825
Lery_1494
Intracellular protease, ThiJ/PfpI family.
    
  0.810
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
    
 0.804
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.