Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lery_0491 | Lery_0878 | Lery_0491 | Lery_0878 | 4-amino-4-deoxychorismate lyase. | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.689 |
| Lery_0491 | aroC | Lery_0491 | Lery_2051 | 4-amino-4-deoxychorismate lyase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.605 |
| Lery_0491 | pabB | Lery_0491 | Lery_1073 | 4-amino-4-deoxychorismate lyase. | Para-aminobenzoate synthase, component I. | 0.870 |
| Lery_0491 | trpD | Lery_0491 | Lery_2283 | 4-amino-4-deoxychorismate lyase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.668 |
| Lery_0491 | trpE | Lery_0491 | Lery_1016 | 4-amino-4-deoxychorismate lyase. | Anthranilate synthase. | 0.882 |
| Lery_0491 | trpG | Lery_0491 | Lery_2284 | 4-amino-4-deoxychorismate lyase. | Anthranilate synthase component II. | 0.805 |
| Lery_0878 | Lery_0491 | Lery_0878 | Lery_0491 | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | 4-amino-4-deoxychorismate lyase. | 0.689 |
| Lery_0878 | aroC | Lery_0878 | Lery_2051 | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.533 |
| Lery_0878 | pabB | Lery_0878 | Lery_1073 | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | Para-aminobenzoate synthase, component I. | 0.947 |
| Lery_0878 | trpA | Lery_0878 | Lery_1387 | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.692 |
| Lery_0878 | trpB | Lery_0878 | Lery_1386 | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.616 |
| Lery_0878 | trpD | Lery_0878 | Lery_2283 | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.642 |
| Lery_0878 | trpE | Lery_0878 | Lery_1016 | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | Anthranilate synthase. | 0.966 |
| Lery_0878 | trpG | Lery_0878 | Lery_2284 | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | Anthranilate synthase component II. | 0.482 |
| aroC | Lery_0491 | Lery_2051 | Lery_0491 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 4-amino-4-deoxychorismate lyase. | 0.605 |
| aroC | Lery_0878 | Lery_2051 | Lery_0878 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.533 |
| aroC | pabB | Lery_2051 | Lery_1073 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase, component I. | 0.900 |
| aroC | trpA | Lery_2051 | Lery_1387 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.838 |
| aroC | trpB | Lery_2051 | Lery_1386 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.588 |
| aroC | trpC | Lery_2051 | Lery_2282 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.726 |
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