Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
fadD-1Long chain fatty acid-CoA ligase. (551 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
  
 0.999
Lery_0878
Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.911
Lery_0957
Short chain-specific acyl CoA dehydrogenase.
 
 
 0.888
fadE
acyl-CoA dehydrogenase.
 
 
 0.885
Lery_0256
acyl-CoA dehydrogenase.
 
 
 0.883
Lery_2267
AMP-binding protein.
 
  
0.880
Lery_2343
2-acylglycerophosphoethanolamine acyltransferase.
  
 0.877
Lery_2466
Glutaryl CoA dehydrogenase.
  
 
 0.866
acdA
Short chain-specific acyl CoA dehydrogenase.
  
 
 0.866
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.850
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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