STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1168Oxidoreductase. (318 aa)    
Predicted Functional Partners:
iolE
Myo-inositol catabolism protein iolE.
  
 
 0.891
Lery_1795
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.848
lpxB_1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
     0.847
Lery_0317
Oxidoreductase.
   
 
  0.793
Lery_1906
Hypothetical protein.
      0.792
iolD
Myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
  
  
 0.776
Lery_1668
Polyketide synthase module.
  
 
 0.763
yvfE
Cell wall biosynthesis regulatory pyridoxal phosphate-dependent protein.
 
 
 0.733
Lery_1990
Chloramphenicol acetyltransferase.
      0.697
iolCB
IolC/IolB transferase kinase protein.
  
 
 0.662
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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