Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1205Hypothetical protein; Belongs to the UPF0276 family. (283 aa)    
Predicted Functional Partners:
Lery_1204
Hypothetical protein.
 
  
 0.996
Lery_1203
Signal peptide protein.
 
  
 0.995
Lery_1206
Silver efflux pump.
 
   
 0.906
Lery_1200
Putative YceI-like family protein; Belongs to the UPF0312 family.
       0.847
ycel
Polyprenyl-pyrophosphate binding protein; Belongs to the UPF0312 family.
       0.847
cybA
Cytochrome b561 transmembrane protein.
       0.752
ctpA_2
Cation efflux transporter.
   
    0.710
Lery_1562
Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.658
lvhB3_1
Type IV secretion system protein VirB3.
   
    0.614
lvhB3_2
Type IV secretion system protein VirB3.
   
    0.614
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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