Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lvrELegionella vir region protein. (260 aa)    
Predicted Functional Partners:
Lery_1271
Hypothetical protein.
       0.844
ftsK
Cell division protein FtsK.
    
 
 0.780
Lery_1267
Hypothetical protein.
       0.765
Lery_1268
Hypothetical protein; Part of the Type IV secretion system. Belongs to the GSP E family.
       0.765
Lery_1269
Hypothetical protein.
       0.763
Lery_1270
Hypothetical protein.
       0.763
lvrD_2
LvrD.
       0.763
Lery_0697
Serine metalloprotease; Belongs to the peptidase S8 family.
   
 0.754
Lery_1272
Hypothetical protein.
       0.751
Lery_1880
Glycosyl Hydrolase Family 88.
    
   0.718
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.