STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1271Hypothetical protein. (237 aa)    
Predicted Functional Partners:
Lery_1269
Hypothetical protein.
  
  
 0.953
Lery_1270
Hypothetical protein.
  
  
 0.953
Lery_1272
Hypothetical protein.
  
  
 0.951
lvhB3_2
Type IV secretion system protein VirB3.
  
 
 0.944
lvhB_13
Vir protein.
  
 
 0.935
lvhB3_1
Type IV secretion system protein VirB3.
  
 
 0.921
lvhB_2
Vir protein.
  
 
 0.909
Lery_2199
Putative conjugative transfer protein TraC.
  
 
 0.907
Lery_2398
Type IV secretory protein VirB4 component.
  
 
 0.906
Lery_1267
Hypothetical protein.
     
 0.819
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.