Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lery_1070 | Lery_1668 | Lery_1070 | Lery_1668 | Branched-chain alpha-keto acid dehydrogenase subunit E2. | Polyketide synthase module. | 0.846 |
Lery_1070 | Lery_1855 | Lery_1070 | Lery_1855 | Branched-chain alpha-keto acid dehydrogenase subunit E2. | Pyruvate dehydrogenase E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.638 |
Lery_1070 | Lery_2467 | Lery_1070 | Lery_2467 | Branched-chain alpha-keto acid dehydrogenase subunit E2. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.999 |
Lery_1070 | merA1_2 | Lery_1070 | Lery_1299 | Branched-chain alpha-keto acid dehydrogenase subunit E2. | Mercuric reductase. | 0.909 |
Lery_1070 | odpB | Lery_1070 | Lery_1071 | Branched-chain alpha-keto acid dehydrogenase subunit E2. | Pyruvate dehydrogenase E1 subunit beta. | 0.999 |
Lery_1070 | pdhA | Lery_1070 | Lery_1072 | Branched-chain alpha-keto acid dehydrogenase subunit E2. | Pyruvate dehydrogenase e1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.997 |
Lery_1070 | sucA | Lery_1070 | Lery_2547 | Branched-chain alpha-keto acid dehydrogenase subunit E2. | 2-oxoglutarate dehydrogenase E1. | 0.994 |
Lery_1519 | Lery_1668 | Lery_1519 | Lery_1668 | Putative CoA-dependent acyltransferase. | Polyketide synthase module. | 0.846 |
Lery_1519 | Lery_2467 | Lery_1519 | Lery_2467 | Putative CoA-dependent acyltransferase. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.999 |
Lery_1519 | merA1_2 | Lery_1519 | Lery_1299 | Putative CoA-dependent acyltransferase. | Mercuric reductase. | 0.905 |
Lery_1519 | odpB | Lery_1519 | Lery_1071 | Putative CoA-dependent acyltransferase. | Pyruvate dehydrogenase E1 subunit beta. | 0.978 |
Lery_1519 | pdhA | Lery_1519 | Lery_1072 | Putative CoA-dependent acyltransferase. | Pyruvate dehydrogenase e1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.942 |
Lery_1519 | sucA | Lery_1519 | Lery_2547 | Putative CoA-dependent acyltransferase. | 2-oxoglutarate dehydrogenase E1. | 0.993 |
Lery_1668 | Lery_1070 | Lery_1668 | Lery_1070 | Polyketide synthase module. | Branched-chain alpha-keto acid dehydrogenase subunit E2. | 0.846 |
Lery_1668 | Lery_1519 | Lery_1668 | Lery_1519 | Polyketide synthase module. | Putative CoA-dependent acyltransferase. | 0.846 |
Lery_1668 | Lery_1855 | Lery_1668 | Lery_1855 | Polyketide synthase module. | Pyruvate dehydrogenase E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.846 |
Lery_1668 | Lery_2467 | Lery_1668 | Lery_2467 | Polyketide synthase module. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.916 |
Lery_1668 | merA1_1 | Lery_1668 | Lery_0797 | Polyketide synthase module. | Mercuric reductase. | 0.518 |
Lery_1668 | merA1_2 | Lery_1668 | Lery_1299 | Polyketide synthase module. | Mercuric reductase. | 0.894 |
Lery_1668 | odpB | Lery_1668 | Lery_1071 | Polyketide synthase module. | Pyruvate dehydrogenase E1 subunit beta. | 0.876 |
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