Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lery_1544Amino acid (glutamine) ABC transporter permease. (215 aa)    
Predicted Functional Partners:
Lery_1543
Amino acid (glutamine) ABC transporter ATP binding protein.
 
 0.998
yqiX
Amino acid (glutamine) ABC transporter periplasmic amino acid binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.997
artJ_1
Arginine 3rd transport system periplasmic binding protein.
 0.920
artJ_2
Arginine 3rd transport system periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.920
Lery_0347
Arginine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.906
Lery_0102
Putative amino acid ABC transporter, periplasmic binding protein.
 
 0.904
Lery_0958
Arginine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.898
argF
Ornithine carbamoyltransferase.
  
  
 0.846
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
    0.830
argH
Argininosuccinate lyase.
  
  
 0.811
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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