STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1571Polysaccharide deacetylase. (306 aa)    
Predicted Functional Partners:
Lery_1572
GNAT family acetyltransferase.
 
     0.865
Lery_1256
Glycosyltransferase, family 2.
  
 
 0.762
Lery_2396
Exported membrane protein.
     
 0.544
Lery_1573
Hypothetical protein.
       0.532
Lery_2088
Dolichol monophosphate mannose synthase.
  
 
  0.515
Lery_2092
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
  0.515
Lery_0819
Chitinase.
     
 0.467
Lery_2303
LphB.
   
 
  0.454
cycA
Cytochrome c.
  
     0.449
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.