STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimI_1GCN5-related N-acetyltransferase. (251 aa)    
Predicted Functional Partners:
Lery_1576
Hypothetical protein.
       0.605
dlpA
DlpA protein (isocitrate and isopropylmalate dehydrogenase family protein).
       0.605
Lery_1578
Hypothetical protein.
       0.605
Lery_0377
Glycoprotease.
  
 0.600
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.529
Lery_1579
4-hydroxy-2-oxovalerate aldolase.
    
  0.527
Lery_0089
Aminotransferase class-III.
    
 0.489
argF
Ornithine carbamoyltransferase.
    
  0.465
gcp
DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.461
Lery_1580
UDP-N-acetylmuramyl tripeptide synthase.
       0.461
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.