Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_1599Threonine(-3-)dehydrogenase. (346 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
  
 
 0.847
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.779
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.735
Lery_2467
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
  
 
 0.706
Lery_2432
Oxidoreductase, FAD-binding protein.
  
 
 0.646
Lery_1612
Alcohol dehydrogenase.
 
0.629
Lery_0044
Putative hydrolase.
    
  0.604
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
 
 0.604
bioF
8-amino-7-oxononanoate synthase.
  
 
 0.604
Lery_1598
Hypothetical protein.
       0.598
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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