STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1599Threonine(-3-)dehydrogenase. (346 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
  
 
 0.852
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.810
Lery_2467
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
  
 
 0.801
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.729
Lery_2432
Oxidoreductase, FAD-binding protein.
  
 
 0.728
Lery_0089
Aminotransferase class-III.
  
 0.715
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
 
 0.686
bioF
8-amino-7-oxononanoate synthase.
  
 
 0.686
purH
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
    
  0.646
Lery_1681
2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.622
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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