STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1602Putative glycosyl transferase. (393 aa)    
Predicted Functional Partners:
rfbA
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.885
Lery_1578
Hypothetical protein.
    
 
 0.837
acpP_1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.827
Lery_0620
Glycosyltransferase.
  
 
 0.761
Lery_1668
Polyketide synthase module.
  
 0.661
Lery_1972
ABC transporter of LPS O-antigen.
 
 
 0.647
ugd
UDP-glucose 6-dehydrogenase.
 
 
 0.646
Lery_1973
ABC transporter of LPS O-antigen.
 
 
 0.637
Lery_0258
Mannose-1-phosphate guanyltransferase.
  
 0.633
galU
Glucose-1-phosphate uridylyltransferase.
 
  
 0.629
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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