Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grpBGlutamate rich protein GrpB. (318 aa)    
Predicted Functional Partners:
Lery_1603
Multidrug resistance ABC transporter ATP binding protein.
 
     0.892
Lery_0001
Ribonuclease E.
 
      0.881
Lery_2252
GNAT family acetyltransferase.
 
    0.728
Lery_1784
MerR family transcriptional regulator.
 
     0.645
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
     
 0.632
Lery_0571
GNAT family acetyltransferase.
 
     0.613
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.606
Lery_2866
N-acetyltransferase GCN5.
 
     0.600
aacA4
Aminoglycoside N(6')acetyltransferase.
  
     0.551
Lery_2357
GNAT family acetyltransferase.
  
     0.531
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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