Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_1629D-alanyl-D-alanine carboxypeptidase. (420 aa)    
Predicted Functional Partners:
Lery_0646
AMPC cephalosporinase.
  
     0.701
ftsI
Peptidoglycan synthetase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
     
 0.683
ponA
Penicillin binding protein 1A.
     
 0.678
chtA
Chitinase 63 precursor.
  
  
  0.652
amiB
N-acetylmuramoyl-L-alanine amidase.
    
 0.630
Lery_1668
Polyketide synthase module.
 
   
 0.612
Lery_2313
Glycosyl hydrolase.
 
 
 0.610
rodA
Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
    
  0.609
Lery_1643
Glycosyl hydrolase family protein.
 
 
 0.609
Lery_0169
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.608
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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