Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_1690HAD-superfamily hydrolase. (474 aa)    
Predicted Functional Partners:
ugd
UDP-glucose 6-dehydrogenase.
 
 
 0.967
rfbA
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.947
Lery_1689
LicD family protein (phosphorylcholine metabolism).
       0.844
Lery_0258
Mannose-1-phosphate guanyltransferase.
  
 
 0.788
Lery_1691
Mechanosensitive ion channel MscS.
       0.773
cinA_2
Competence damage inducible protein CinA.
       0.773
capD
Nucleoside-diphosphate sugar epimerase.
  
 
 0.696
Lery_1668
Polyketide synthase module.
  
  
 0.695
Lery_1602
Putative glycosyl transferase.
  
 
 0.598
Lery_1976
Hypothetical protein.
  
 
 0.598
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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