STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1736ABC transporter ATP binding protein. (245 aa)    
Predicted Functional Partners:
Lery_1737
ABC transporter permease.
 
 0.998
Lery_1735
ABC transport system periplasmic substrate binding protein.
 
 0.992
ttg2B
Toluene tolerance protein Ttg2B.
 
 0.985
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.982
Lery_0905
ABC transporter permease.
  
 0.953
Lery_1734
Transport protein.
 
 
  0.906
Lery_0904
Putative transmembrane protein.
  
 0.901
Lery_2294
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
  
 0.774
ttg2D
Toluene tolerance protein Ttg2D.
  
 
 0.648
pal
Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
  0.647
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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