rpoE protein (Legionella erythra) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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gene neighborhood

gene co-occurrence

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Your Current Organism:

Legionella erythra

NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lery_1765	cptB	Lery_1765	Lery_1764	Hypothetical protein.	Antitoxin CptB.	0.866
Lery_1765	rpoE	Lery_1765	Lery_1766	Hypothetical protein.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.753
Lery_1765	ruvB	Lery_1765	Lery_1767	Hypothetical protein.	Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.	0.708
Lery_1765	tolQ	Lery_1765	Lery_1769	Hypothetical protein.	Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.588
Lery_1765	tolR	Lery_1765	Lery_1770	Hypothetical protein.	Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.545
Lery_1765	ybgC	Lery_1765	Lery_1768	Hypothetical protein.	acyl-CoA thioesterase.	0.699
cptB	Lery_1765	Lery_1764	Lery_1765	Antitoxin CptB.	Hypothetical protein.	0.866
cptB	rpoE	Lery_1764	Lery_1766	Antitoxin CptB.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.769
cptB	ruvB	Lery_1764	Lery_1767	Antitoxin CptB.	Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.	0.709
cptB	tolQ	Lery_1764	Lery_1769	Antitoxin CptB.	Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.666
cptB	tolR	Lery_1764	Lery_1770	Antitoxin CptB.	Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.655
cptB	ybgC	Lery_1764	Lery_1768	Antitoxin CptB.	acyl-CoA thioesterase.	0.709
rpoA	rpoB	Lery_1445	Lery_1477	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	Lery_1445	Lery_1476	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoE	Lery_1445	Lery_1766	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.874
rpoA	rpoZ	Lery_1445	Lery_0709	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoB	rpoA	Lery_1477	Lery_1445	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	Lery_1477	Lery_1476	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoE	Lery_1477	Lery_1766	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.887
rpoB	rpoZ	Lery_1477	Lery_0709	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.994