STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1889Glucoamylase. (431 aa)    
Predicted Functional Partners:
Lery_0663
Aminopeptidase.
  
     0.716
glk
Glucokinase; Belongs to the bacterial glucokinase family.
    
 0.697
qseC_2
Two component sensor kinase.
  
     0.693
treF
Alpha,alpha-trehalase.
  
  
  0.664
Lery_0819
Chitinase.
  
  
 0.641
Lery_0035
Major facilitator family transporter.
  
     0.595
Lery_0697
Serine metalloprotease; Belongs to the peptidase S8 family.
  
     0.592
chtA
Chitinase 63 precursor.
  
     0.581
Lery_1890
Hypothetical protein.
       0.580
Lery_1560
Pyoverdine biosynthesis protein PvcA.
  
     0.574
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.