Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_1902Major facilitator family transporter. (438 aa)    
Predicted Functional Partners:
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.699
hemD
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
  
 0.591
Lery_2432
Oxidoreductase, FAD-binding protein.
     
 0.557
Lery_1900
ATP dependent DNA ligase.
       0.473
Lery_1901
Beta-lactamase superfamily domain protein.
       0.473
Lery_0281
Inosine-uridine preferring nucleoside hydrolase; Belongs to the IUNH family.
       0.470
Lery_1903
Hypothetical protein.
       0.470
Lery_0516
Phytanoyl-CoA dioxygenase.
       0.456
Lery_1904
Histidine triad (HIT) protein.
       0.441
proP6
Proline/betaine transporter ProP6.
  
  
 
0.412
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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