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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_1985Asparagine synthetase, glutamine-hydrolyzing. (625 aa)    
Predicted Functional Partners:
lysAC
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.849
Lery_1987
NAD dependent epimerase/dehydratase family protein.
 
    0.842
fcf1
dTDP-4-dehydro-6-deoxyglucose reductase.
 
    0.837
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
    0.769
lhgO
L-2-hydroxyglutarate oxidase LhgO.
 
     0.673
Lery_1986
Methyltransferase domain protein.
  
    0.672
Lery_1990
Chloramphenicol acetyltransferase.
 
     0.669
Lery_1982
Hypothetical protein.
 
     0.665
fadH
2,4-dienoyl-CoA reductase FadH1.
  
 
 0.658
glnA
Glutamine synthetase.
    
 0.658
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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