STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2012Opacity protein-like surface antigen. (212 aa)    
Predicted Functional Partners:
Lery_2013
Opacity protein-like surface antigen.
      
0.781
Lery_1294
Outer membrane protein OmpH; Belongs to the skp family.
  
 
 
 0.672
Lery_2011
Hypothetical protein.
       0.587
Lery_0198
Hypothetical protein.
  
     0.586
Lery_2748
Putative helicase/relaxase.
  
 
   0.569
Lery_0474
Protein IcmE (DotG).
  
    0.568
lvrA_1
Legionella vir region protein.
  
     0.531
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.530
Lery_1280
Hypothetical protein.
  
     0.519
Lery_1029
Hypothetical protein.
  
     0.514
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.